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1. sivirep sivirep Public

   Data Wrangling and Automated Reports from 'SIVIGILA' source

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2. epiparameter epiparameter Public

   R package with classes and helper functions for working with epidemiological parameters and access to a library of epidemiological parameters for infectious diseases

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3. serofoi serofoi Public

   Estimates the Force-of-Infection of a given pathogen from population based sero-prevalence studies

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4. epidemics epidemics Public

   A library of published compartmental epidemic models, and classes to represent demographic structure, non-pharmaceutical interventions, and vaccination regimes, to compose epidemic scenarios.

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5. vaccineff vaccineff Public

   R package with tools for estimating vaccine effectiveness and vaccine related metrics

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6. cfr cfr Public

   R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series

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